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mouse brain cdna mate  (TaKaRa)


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    TaKaRa mouse brain cdna mate
    Mouse Brain Cdna Mate, supplied by TaKaRa, used in various techniques. Bioz Stars score: 93/100, based on 524 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/mouse+brain+cdna/Mouse+Brain+QUICK-Clone+cDNA/pm40812511-49-21-28
    Average 93 stars, based on 524 article reviews
    mouse brain cdna mate - by Bioz Stars, 2026-09
    93/100 stars

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    Related Articles

    Amplification:

    Article Title: Weak and tunable adhesion-clutch drives rapid cell migration and glioblastoma motility
    Article Snippet: Unphosphorylated (S101A/S249A: AA) and phosphomimic (S101D/S249D: DD) mutants of rat shootin1b were generated with the QuickChange II site -directed mutagenesis kit (Stratagene) to replace each serine (S) with alanine (A) or aspartate (D) using the following primers : S101A Fw (5’-AAAAGAATCGCCATGCTATACATG-3’), S101A Rv (5’-CATGTATAGCATGGCGATTCTTTT-3’), S101D Fw (5’-AAAAGAATCGACATGCTATACATG-3’), S101D Rv (5’-CATGTATAGCATGTCGATTCTTTT-3’), S249A Fw (5’-AAGAGACAAGCCCACCTTCTGCTG-3’), S249A Rv (5’-CAGCAGAAGGTGGGCTTGTCTCTT-3’), S249D Fw (5’-AAGAGACAAGACCACCTTCTGCTG-3’), S249D Rv (5’-CAGCAGAAGGTGGTCTTGTCTCTT-3’). cDNA of shootin1b DD or AA mutants was sub-cloned into pCMV-flag vector . .. To generate AcGFP-integrin β1 and β2 intracellular domains (ICDs), integrin β1- or β2-ICD was amplified mouse brain cDNA (for integrin β1 cDNA) or mouse dendritic cell cDNA (for integrin β2 cDNA) by PCR using the following primers : Integrin β1-ICD Fw (5’-AAAGGATCCAAACTTTTAATGATAATTCAT-3’), Integrin β1-ICD Rv (5’-AAAGTCGACTCATTTTCCCTCATACTTCG-3’), Integrin β2-ICD Fw (5’-AAAGGATCCAAGGCCCTGACCCACCT-3’), Integrin β2-ICD Rv (5’-AAAGTCGACCTAGCTTTCAGCAAACTTGGG-3’). cDNA of integrin β1-, β2-ICD and L1-ICD were subcloned into AcGFP vector (Clontech, catalog number: 632470). .. For mouse talin1 and human shootin1b RNAi experiments, we used a Block-iT Pol II miR RNAi expression vector kit (Invitrogen, catalog number: K493600) and Block-iT RNAi designer.

    Article Title: Glaucoma-associated Optineurin mutations increase transmitophagy in a vertebrate optic nerve
    Article Snippet: All the OPTN mutations (E50K, M98K, F178A, D474N, E478G, and H486R) were then introduced into this construct by QuikChange® Site-Directed Mutagenesis Kit (Stratagene) using the corresponding primers (Primer List below, mutagenized bases are shown in uppercase) and verified by Sanger sequencing. .. The final step of placing all these under control of the full 20kb of the zebrafish Isl2b promoter, which drives RGC-specific expression in both zebrafish ( ) and X. laevis , was accomplished by recombineering (Chan et al., 2007), carried out with minor modifications ( ). pCS2(Isl2b:Tom20-mCherry-Apex2_msSOD2UTR): First, to improve the mitochondria targeting efficiency of the transmitophagy reporter, pCS2(1kb Isl2b):Mito-EGFP-mCherry , the SV40pA was replaced by the 3’UTR of msSOD2 ( ) amplified from mouse brain cDNA (Clontech 637301) using primers AA35 and AA36 and inserted into the XbaI and NotI sites. ..

    Polymerase Chain Reaction:

    Article Title: Weak and tunable adhesion-clutch drives rapid cell migration and glioblastoma motility
    Article Snippet: Unphosphorylated (S101A/S249A: AA) and phosphomimic (S101D/S249D: DD) mutants of rat shootin1b were generated with the QuickChange II site -directed mutagenesis kit (Stratagene) to replace each serine (S) with alanine (A) or aspartate (D) using the following primers : S101A Fw (5’-AAAAGAATCGCCATGCTATACATG-3’), S101A Rv (5’-CATGTATAGCATGGCGATTCTTTT-3’), S101D Fw (5’-AAAAGAATCGACATGCTATACATG-3’), S101D Rv (5’-CATGTATAGCATGTCGATTCTTTT-3’), S249A Fw (5’-AAGAGACAAGCCCACCTTCTGCTG-3’), S249A Rv (5’-CAGCAGAAGGTGGGCTTGTCTCTT-3’), S249D Fw (5’-AAGAGACAAGACCACCTTCTGCTG-3’), S249D Rv (5’-CAGCAGAAGGTGGTCTTGTCTCTT-3’). cDNA of shootin1b DD or AA mutants was sub-cloned into pCMV-flag vector . .. To generate AcGFP-integrin β1 and β2 intracellular domains (ICDs), integrin β1- or β2-ICD was amplified mouse brain cDNA (for integrin β1 cDNA) or mouse dendritic cell cDNA (for integrin β2 cDNA) by PCR using the following primers : Integrin β1-ICD Fw (5’-AAAGGATCCAAACTTTTAATGATAATTCAT-3’), Integrin β1-ICD Rv (5’-AAAGTCGACTCATTTTCCCTCATACTTCG-3’), Integrin β2-ICD Fw (5’-AAAGGATCCAAGGCCCTGACCCACCT-3’), Integrin β2-ICD Rv (5’-AAAGTCGACCTAGCTTTCAGCAAACTTGGG-3’). cDNA of integrin β1-, β2-ICD and L1-ICD were subcloned into AcGFP vector (Clontech, catalog number: 632470). .. For mouse talin1 and human shootin1b RNAi experiments, we used a Block-iT Pol II miR RNAi expression vector kit (Invitrogen, catalog number: K493600) and Block-iT RNAi designer.

    Article Title: Functional Diversity of Human Basic Helix-Loop-Helix Transcription Factor TCF4 Isoforms Generated by Alternative 5′ Exon Usage and Splicing
    Article Snippet: .. Full-length coding regions of NeuroD2 and Id2 were PCR-amplified from mouse brain cDNA and inserted into pQM-CMV-E2-C (Icosagen) in front of E2 tag and pmCherry-C (Clontech) behind mCherry sequence, respectively. .. For E-box reporter vector pGL4.29[luc2P/12 μE5/Hygro], the CRE binding-site in pGL4.29[luc2P/CRE/Hygro] (Promega) was replaced with 12 μE5 E-boxes by tandem insertion of annealed oligonucleotides.

    Article Title: Leucine-Rich Repeats and Transmembrane Domain 2 Controls Protein Sorting in the Striatal Projection System and Its Deficiency Causes Disturbances in Motor Responses and Monoamine Dynamics
    Article Snippet: .. Mouse Lrtm2, Gad1, and Gabbr1 cDNAs were PCR-cloned from mouse brain cDNA (Takara Bio), optionally epitope-tagged, and sequenced. ..

    Control:

    Article Title: Nogo receptor is involved in the adhesion of dendritic cells to myelin
    Article Snippet: Assays used for mouse mRNA detection were as follows: NgR1 (Mm00452228_m1), NgR2 (Mm01336368_g1), LINGO-1 (Mm01173306_m1), TROY (Mm00443506_m1), and p75 NTR (Mm00446296_m1). .. 18 s rRNA was measured in each sample as an endogenous control in order to control for varying cDNA concentrations and human or mouse brain cDNA were used as a positive control for all assays (commercially available human foetal brain RNA was used from Clontech Laboratories, Inc., Mountain View, CA, USA). ..

    Article Title: Glaucoma-associated Optineurin mutations increase transmitophagy in a vertebrate optic nerve
    Article Snippet: All the OPTN mutations (E50K, M98K, F178A, D474N, E478G, and H486R) were then introduced into this construct by QuikChange® Site-Directed Mutagenesis Kit (Stratagene) using the corresponding primers (Primer List below, mutagenized bases are shown in uppercase) and verified by Sanger sequencing. .. The final step of placing all these under control of the full 20kb of the zebrafish Isl2b promoter, which drives RGC-specific expression in both zebrafish ( ) and X. laevis , was accomplished by recombineering (Chan et al., 2007), carried out with minor modifications ( ). pCS2(Isl2b:Tom20-mCherry-Apex2_msSOD2UTR): First, to improve the mitochondria targeting efficiency of the transmitophagy reporter, pCS2(1kb Isl2b):Mito-EGFP-mCherry , the SV40pA was replaced by the 3’UTR of msSOD2 ( ) amplified from mouse brain cDNA (Clontech 637301) using primers AA35 and AA36 and inserted into the XbaI and NotI sites. ..

    Positive Control:

    Article Title: Nogo receptor is involved in the adhesion of dendritic cells to myelin
    Article Snippet: Assays used for mouse mRNA detection were as follows: NgR1 (Mm00452228_m1), NgR2 (Mm01336368_g1), LINGO-1 (Mm01173306_m1), TROY (Mm00443506_m1), and p75 NTR (Mm00446296_m1). .. 18 s rRNA was measured in each sample as an endogenous control in order to control for varying cDNA concentrations and human or mouse brain cDNA were used as a positive control for all assays (commercially available human foetal brain RNA was used from Clontech Laboratories, Inc., Mountain View, CA, USA). ..

    Sequencing:

    Article Title: Functional Diversity of Human Basic Helix-Loop-Helix Transcription Factor TCF4 Isoforms Generated by Alternative 5′ Exon Usage and Splicing
    Article Snippet: .. Full-length coding regions of NeuroD2 and Id2 were PCR-amplified from mouse brain cDNA and inserted into pQM-CMV-E2-C (Icosagen) in front of E2 tag and pmCherry-C (Clontech) behind mCherry sequence, respectively. .. For E-box reporter vector pGL4.29[luc2P/12 μE5/Hygro], the CRE binding-site in pGL4.29[luc2P/CRE/Hygro] (Promega) was replaced with 12 μE5 E-boxes by tandem insertion of annealed oligonucleotides.

    Expressing:

    Article Title: Glaucoma-associated Optineurin mutations increase transmitophagy in a vertebrate optic nerve
    Article Snippet: All the OPTN mutations (E50K, M98K, F178A, D474N, E478G, and H486R) were then introduced into this construct by QuikChange® Site-Directed Mutagenesis Kit (Stratagene) using the corresponding primers (Primer List below, mutagenized bases are shown in uppercase) and verified by Sanger sequencing. .. The final step of placing all these under control of the full 20kb of the zebrafish Isl2b promoter, which drives RGC-specific expression in both zebrafish ( ) and X. laevis , was accomplished by recombineering (Chan et al., 2007), carried out with minor modifications ( ). pCS2(Isl2b:Tom20-mCherry-Apex2_msSOD2UTR): First, to improve the mitochondria targeting efficiency of the transmitophagy reporter, pCS2(1kb Isl2b):Mito-EGFP-mCherry , the SV40pA was replaced by the 3’UTR of msSOD2 ( ) amplified from mouse brain cDNA (Clontech 637301) using primers AA35 and AA36 and inserted into the XbaI and NotI sites. ..

    Plasmid Preparation:

    Article Title: Experimental and computational evidence that Calpain-10 binds to the carboxy terminus of Na V 1.2 and Na V 1.6
    Article Snippet: .. The procedure followed for Y2H screens was described before by Vega et al. . For the initial screen, yeast cells of strain L40 were co-transfected with the bait plasmid pSN12CT together with a commercial plasmid library derived from adult mouse brain cDNA in fusion with GAL4 activation domain (Clontech, catalog #ML4008AH). ..

    Derivative Assay:

    Article Title: Experimental and computational evidence that Calpain-10 binds to the carboxy terminus of Na V 1.2 and Na V 1.6
    Article Snippet: .. The procedure followed for Y2H screens was described before by Vega et al. . For the initial screen, yeast cells of strain L40 were co-transfected with the bait plasmid pSN12CT together with a commercial plasmid library derived from adult mouse brain cDNA in fusion with GAL4 activation domain (Clontech, catalog #ML4008AH). ..

    Activation Assay:

    Article Title: Experimental and computational evidence that Calpain-10 binds to the carboxy terminus of Na V 1.2 and Na V 1.6
    Article Snippet: .. The procedure followed for Y2H screens was described before by Vega et al. . For the initial screen, yeast cells of strain L40 were co-transfected with the bait plasmid pSN12CT together with a commercial plasmid library derived from adult mouse brain cDNA in fusion with GAL4 activation domain (Clontech, catalog #ML4008AH). ..



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    (A and B) Top: Correction of Atp1a3 mutations (red) to the wild type nucleotide (green) with co-installation of benign synonymous (silent) edits (blue). Bottom: Correction with RNA electroporation in mouse fibroblasts ( n = 3). Dots show individual replicates. (A) Correction <t>in</t> <t>C57BL/6J</t> Atp1a3 D801N c.2401A mouse primary fibroblasts. (B) Correction in E815K mouse primary fibroblasts. (C) D801N-PE-AAV9 (top) and E815K-PE-AAV9 (bottom) optimized components. (D) PE-AAV9 system encoding split-intein PE6c prime editor halves, epegRNA, ngRNA, and dsgRNA. Npu N or Npu C, Nostoc punctiforme intein N-terminal or C-terminal halves, respectively; P EFS , Promoter, elongation factor 1α short; P hU6 , Promoter, human U6 polymerase III; P mU6, Promoter, mouse U6 polymerase III; W3, minimized gamma portion of the woodchuck hepatitis virus post-transcriptional regulatory element; bGH, bovine growth hormone polyadenylation signal. (E) Mice were characterized by molecular, behavioral, and biometric readouts. (F–I) HTS quantification ( n = 4–7) from gDNA (F and G) and <t>cDNA</t> (H and I) of bulk and GFP + nuclei from D801N mice (F and H) or E815K mice (G and I) injected with PE-AAV9 (PE) or phosphate-buffer saline (PBS, vehicle). (J and K) Specific activity of Atp1a3 in hippocampal homogenates of PE- or vehicle-treated D801N mice (J, n =3–16) or E815K mice (K, n = 5–12). Two-way ANOVA with Tukey’s multiple comparisons. ns = not significant, * p < 0.05, ** p < 0.01, *** p < 0.001, and **** p < 0.0001. For (F)–(K), dots show values from individual mice with tissue collected at P28. For (A), (B), and (F)–(I), samples start from ~50% wild-type genotype heterozygous baseline (dotted line). See also .
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    93
    TaKaRa mouse brain cdna
    (A and B) Top: Correction of Atp1a3 mutations (red) to the wild type nucleotide (green) with co-installation of benign synonymous (silent) edits (blue). Bottom: Correction with RNA electroporation in mouse fibroblasts ( n = 3). Dots show individual replicates. (A) Correction <t>in</t> <t>C57BL/6J</t> Atp1a3 D801N c.2401A mouse primary fibroblasts. (B) Correction in E815K mouse primary fibroblasts. (C) D801N-PE-AAV9 (top) and E815K-PE-AAV9 (bottom) optimized components. (D) PE-AAV9 system encoding split-intein PE6c prime editor halves, epegRNA, ngRNA, and dsgRNA. Npu N or Npu C, Nostoc punctiforme intein N-terminal or C-terminal halves, respectively; P EFS , Promoter, elongation factor 1α short; P hU6 , Promoter, human U6 polymerase III; P mU6, Promoter, mouse U6 polymerase III; W3, minimized gamma portion of the woodchuck hepatitis virus post-transcriptional regulatory element; bGH, bovine growth hormone polyadenylation signal. (E) Mice were characterized by molecular, behavioral, and biometric readouts. (F–I) HTS quantification ( n = 4–7) from gDNA (F and G) and <t>cDNA</t> (H and I) of bulk and GFP + nuclei from D801N mice (F and H) or E815K mice (G and I) injected with PE-AAV9 (PE) or phosphate-buffer saline (PBS, vehicle). (J and K) Specific activity of Atp1a3 in hippocampal homogenates of PE- or vehicle-treated D801N mice (J, n =3–16) or E815K mice (K, n = 5–12). Two-way ANOVA with Tukey’s multiple comparisons. ns = not significant, * p < 0.05, ** p < 0.01, *** p < 0.001, and **** p < 0.0001. For (F)–(K), dots show values from individual mice with tissue collected at P28. For (A), (B), and (F)–(I), samples start from ~50% wild-type genotype heterozygous baseline (dotted line). See also .
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    (A and B) Top: Correction of Atp1a3 mutations (red) to the wild type nucleotide (green) with co-installation of benign synonymous (silent) edits (blue). Bottom: Correction with RNA electroporation in mouse fibroblasts ( n = 3). Dots show individual replicates. (A) Correction in C57BL/6J Atp1a3 D801N c.2401A mouse primary fibroblasts. (B) Correction in E815K mouse primary fibroblasts. (C) D801N-PE-AAV9 (top) and E815K-PE-AAV9 (bottom) optimized components. (D) PE-AAV9 system encoding split-intein PE6c prime editor halves, epegRNA, ngRNA, and dsgRNA. Npu N or Npu C, Nostoc punctiforme intein N-terminal or C-terminal halves, respectively; P EFS , Promoter, elongation factor 1α short; P hU6 , Promoter, human U6 polymerase III; P mU6, Promoter, mouse U6 polymerase III; W3, minimized gamma portion of the woodchuck hepatitis virus post-transcriptional regulatory element; bGH, bovine growth hormone polyadenylation signal. (E) Mice were characterized by molecular, behavioral, and biometric readouts. (F–I) HTS quantification ( n = 4–7) from gDNA (F and G) and cDNA (H and I) of bulk and GFP + nuclei from D801N mice (F and H) or E815K mice (G and I) injected with PE-AAV9 (PE) or phosphate-buffer saline (PBS, vehicle). (J and K) Specific activity of Atp1a3 in hippocampal homogenates of PE- or vehicle-treated D801N mice (J, n =3–16) or E815K mice (K, n = 5–12). Two-way ANOVA with Tukey’s multiple comparisons. ns = not significant, * p < 0.05, ** p < 0.01, *** p < 0.001, and **** p < 0.0001. For (F)–(K), dots show values from individual mice with tissue collected at P28. For (A), (B), and (F)–(I), samples start from ~50% wild-type genotype heterozygous baseline (dotted line). See also .

    Journal: Cell

    Article Title: In vivo prime editing rescues alternating hemiplegia of childhood in mice

    doi: 10.1016/j.cell.2025.06.038

    Figure Lengend Snippet: (A and B) Top: Correction of Atp1a3 mutations (red) to the wild type nucleotide (green) with co-installation of benign synonymous (silent) edits (blue). Bottom: Correction with RNA electroporation in mouse fibroblasts ( n = 3). Dots show individual replicates. (A) Correction in C57BL/6J Atp1a3 D801N c.2401A mouse primary fibroblasts. (B) Correction in E815K mouse primary fibroblasts. (C) D801N-PE-AAV9 (top) and E815K-PE-AAV9 (bottom) optimized components. (D) PE-AAV9 system encoding split-intein PE6c prime editor halves, epegRNA, ngRNA, and dsgRNA. Npu N or Npu C, Nostoc punctiforme intein N-terminal or C-terminal halves, respectively; P EFS , Promoter, elongation factor 1α short; P hU6 , Promoter, human U6 polymerase III; P mU6, Promoter, mouse U6 polymerase III; W3, minimized gamma portion of the woodchuck hepatitis virus post-transcriptional regulatory element; bGH, bovine growth hormone polyadenylation signal. (E) Mice were characterized by molecular, behavioral, and biometric readouts. (F–I) HTS quantification ( n = 4–7) from gDNA (F and G) and cDNA (H and I) of bulk and GFP + nuclei from D801N mice (F and H) or E815K mice (G and I) injected with PE-AAV9 (PE) or phosphate-buffer saline (PBS, vehicle). (J and K) Specific activity of Atp1a3 in hippocampal homogenates of PE- or vehicle-treated D801N mice (J, n =3–16) or E815K mice (K, n = 5–12). Two-way ANOVA with Tukey’s multiple comparisons. ns = not significant, * p < 0.05, ** p < 0.01, *** p < 0.001, and **** p < 0.0001. For (F)–(K), dots show values from individual mice with tissue collected at P28. For (A), (B), and (F)–(I), samples start from ~50% wild-type genotype heterozygous baseline (dotted line). See also .

    Article Snippet: For the validation of TaqMan probes (species specificity or species cross-reaction), TaqMan probes were tested on mouse brain cDNA derived from wild type mice (brain tissue from JR #664, C57BL/6J, The Jackson Laboratory) and human cDNA derived from a mixture of human tissues including the CNS (Takara #636693).

    Techniques: Electroporation, Virus, Injection, Saline, Activity Assay